A. Bernot, Analyse de génomes, transcriptomes et protéomes, Paris : Dunod, p.222, 2001.

G. Ramachandran and V. Sasisekharan, Conformation of Polypeptides and Proteins, Adv Prot Chem, vol.23, pp.283-437, 1968.
DOI : 10.1016/S0065-3233(08)60402-7

O. Becker, A. Mackerell, B. Roux, and M. Watanabe, Computational biochemistry and biophysics, p.512, 2001.
DOI : 10.1201/9780203903827

J. Mccammon, B. Gelin, and M. Karplus, Dynamics of folded proteins, Nature, vol.58, issue.5612, pp.585-594
DOI : 10.1038/267585a0

M. Levitt and A. Warshel, Computer simulation of protein folding, Nature, vol.13, issue.5494, pp.694-98, 1975.
DOI : 10.1038/253694a0

Y. Duan and P. Kollman, Pathways to a Protein Folding Intermediate Observed in a 1-Microsecond Simulation in Aqueous Solution, Science, vol.282, issue.5389, pp.740-744, 1998.
DOI : 10.1126/science.282.5389.740

B. Zagrovic, C. Snow, M. Shirts, and V. Pande, Simulation of Folding of a Small Alpha-helical Protein in Atomistic Detail using Worldwide-distributed Computing, Journal of Molecular Biology, vol.323, issue.5, pp.927-964, 2002.
DOI : 10.1016/S0022-2836(02)00997-X

C. Simmerling, B. Strockbine, and A. Roitberg, All-Atom Structure Prediction and Folding Simulations of a Stable Protein, Journal of the American Chemical Society, vol.124, issue.38, pp.11258-11267, 2002.
DOI : 10.1021/ja0273851

A. Sali, 100,000 protein structures for the biologist, Nature Structural Biology, vol.5, issue.12, pp.1029-1061, 1998.
DOI : 10.1038/2900

D. Baker and A. Sali, Protein Structure Prediction and Structural Genomics, Science, vol.294, issue.5540, pp.93-99, 2001.
DOI : 10.1126/science.1065659

D. Eisenberg, A problem for the theory of biological structure, Nature, vol.286, issue.5845, pp.99-100, 1982.
DOI : 10.1038/295099a0

M. Dwyer, L. Looger, and H. Hellinga, Computational Design of a Biologically Active Enzyme, Science, vol.304, issue.5679, pp.1967-71, 2004.
DOI : 10.1126/science.1098432

B. Kuhlman, G. Dantas, and G. Ireton, Design of a Novel Globular Protein Fold with Atomic-Level Accuracy, Science, vol.302, issue.5649, pp.1364-1372, 2003.
DOI : 10.1126/science.1089427

P. Kraulis, MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures, Journal of Applied Crystallography, vol.24, issue.5, pp.946-50, 1991.
DOI : 10.1107/S0021889891004399

E. Merritt and M. Murphy, Raster3D Version 2.0. A program for photorealistic molecular graphics, Acta Crystallographica Section D Biological Crystallography, vol.50, issue.6, pp.869-73, 1994.
DOI : 10.1107/S0907444994006396

W. Delano, The Pymol molecular graphics system